Bonjour,
je fais tourner un pipeline python+R en utilisant snakemake, et j’ai une erreur de compatibilité GLIBC liée à la librairie R “tidyverse”, qui n’était pas installé, et que j’ai installé en local (export R_LIBS_USER=/shared/projects/dils_oedulis/R_clean).
Voici l’erreur:
Rscript /shared/projects/dils_oedulis/dils_4D/DILS_4pop/bin/model_comp.R nIteration=10 datapath=/shared/projects/dils_oedulis/dils_4D/DILS_4pop/floys
Error: package or namespace load failed for ‘tidyverse’:
.onAttach failed in attachNamespace() for 'tidyverse', details:
call: NULL
error: package or namespace load failed for ‘ggplot2’:
.onLoad failed in loadNamespace() for 'scales', details:
call: dyn.load(file, DLLpath = DLLpath, ...)
error: unable to load shared object '/shared/software/miniconda_deployment/envs/r-4.5.1/lib/R/library/farver/libs/farver.so':
/lib/x86_64-linux-gnu/libc.so.6: version `GLIBC_2.38' not found (required by /shared/software/miniconda_deployment/envs/r-4.5.1/lib/R/library/farver/libs/farver.so)
Merci pour votre aide,
Christelle