I would like to test out these three programs, but I am not being able to compile them. I think because I don't know very well how to install perl programs and set the right paths. Anyway, it would be easier if these three programs would be in the cluster:
NextPolish - GitHub - Nextomics/NextPolish: Fast and accurately polish the genome generated by long reads.
SSPACE-LongRead - GitHub - Runsheng/sspace_longread: The modified version of sspac_longread.pl, add compatibility with blasr5.x
backmap.pl - GitHub - schellt/backmap: Wrapper for short and long read mapping, creation of quality report(s) and estimation of genome size
Thank you for your help