Bonjour,
Sur de nouveaux comptes, le lancement de certains outils déclenche des messages de warning :
$ fastqc --version
perl: warning: Setting locale failed.
perl: warning: Please check that your locale settings:
LANGUAGE = (unset),
LC_ALL = (unset),
LANG = "C.UTF-8"
are supported and installed on your system.
perl: warning: Falling back to the standard locale ("C").
FastQC v0.11.9
ou encore :
$ bowtie2 --version
perl: warning: Setting locale failed.
perl: warning: Please check that your locale settings:
LANGUAGE = (unset),
LC_ALL = (unset),
LANG = "C.UTF-8"
are supported and installed on your system.
perl: warning: Falling back to the standard locale ("C").
/shared/ifbstor1/software/miniconda/envs/bowtie2-2.3.5/bin/bowtie2-align-s version 2.3.5.1
64-bit
Built on
Wed Apr 17 02:40:25 UTC 2019
Compiler: gcc version 7.3.0 (crosstool-NG 1.23.0.450-d54ae)
Options: -O3 -m64 -msse2 -funroll-loops -g3 -fvisibility-inlines-hidden -std=c++17 -fmessage-length=0 -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe -isystem /shared/ifbstor1/software/miniconda/envs/bowtie2-2.3.5/include -fdebug-prefix-map=/opt/conda/conda-bld/bowtie2_1581374363721/work=/usr/local/src/conda/bowtie2-2.3.5.1 -fdebug-prefix-map=/shared/ifbstor1/software/miniconda/envs/bowtie2-2.3.5=/usr/local/src/conda-prefix -std=c++98 -DPOPCNT_CAPABILITY -DWITH_TBB -DNO_SPINLOCK -DWITH_QUEUELOCK=1
Sizeof {int, long, long long, void*, size_t, off_t}: {4, 8, 8, 8, 8, 8}
Savez-vous comment régler cela ?
Exemple de compte qui a le problème : pgrognet
Exemple de compte qui n'a pas le problème : ppoulain