Hello
I'm trying to use AcorF to dela with redundancy, for that i calculated correlation matrix in r using cor function :
corr_resultat <- as.matrix(cor(metabolomics_data, use = "complete.obs"))
After i saved data as csv
write.csv2(corr_resultat , file = "correlation_resultat.csv")
afetr that i transform data as txt and i upload the correlation matrix , data matrix and variable metadata
after excuting the program i gor this error message : (repeated several times)
Argument 0,051099368 isnt numeric in numeric gt (>) at
I tried the correlation matrix as txt data
write.table(corr_resultat , file = "txt_correlation_resultat.txt", sep = "\t",
row.names = FALSE)
And i upload the three files ans excuting AcorF and this i got this error message :
Use of uninitialized value $bmass in subtraction (-) at /shared/ifbstor1/galaxy/shed_tools/toolshed.g2.bx.psu.edu/repos/melpetera/acorf/15430e89c97d/acorf/ACF/Analytic_correlation_filtration.pl line 113, <F1> line 1.
Do you know please how i can solve this problem ?
Thank you in advance