Bonjour,
J'aimerais utiliser un plugin de variant effect predictor (Conservation) mais ca ne marche pas, ca me met une erreur disant qu'il manque quelques chose :
Failed to compile plugin Conservation: Can't locate Bio/DB/BigFile.pm in @INC (you may need to install the Bio::DB::BigFile module) (@INC contains: /shared/software/miniconda3-admin/envs/ensembl-vep-103.1/share/ensembl-vep-103.1-0/ /shared/software/miniconda3-admin/envs/ensembl-vep-103.1/share/ensembl-vep-103.1-0/modules /shared/software/miniconda3-admin/envs/ensembl-vep-103.1/share/ensembl-vep-103.1-0 /shared/software/ensemblapi/src/bioperl-1.6.1 /shared/software/ensemblapi/src/ensembl/modules /shared/software/ensemblapi/src/ensembl-compara/modules /shared/software/ensemblapi/src/ensembl-variation/modules /shared/software/ensemblapi/src/ensembl-funcgen/modules /shared/software/miniconda3-admin/envs/ensembl-vep-103.1/lib/site_perl/5.26.2/x86_64-linux-thread-multi /shared/software/miniconda3-admin/envs/ensembl-vep-103.1/lib/site_perl/5.26.2 /shared/software/miniconda3-admin/envs/ensembl-vep-103.1/lib/5.26.2/x86_64-linux-thread-multi /shared/software/miniconda3-admin/envs/ensembl-vep-103.1/lib/5.26.2 .) at /shared/software/miniconda3-admin/envs/ensembl-vep-103.1/share/ensembl-vep-103.1-0/Bio/EnsEMBL/IO/BigFileParser.pm line 34.
Est ce que quelqu'un sait comment résoudre ce problème ?
Par ailleurs pour certain plugin il manque des fichiers, en soi c'est pas hyper génant car je peux réinstaller tous les plugins dans un dossier perso mais c'est un peu dommage d'avvoir un doublon juste parcequ'il manque quelques fichiers.
WARNING: Failed to instantiate plugin ExACpLI: ERROR: ExACpLI values file /shared/software/miniconda3-admin/envs/ensembl-vep-103.1/share/ensembl-vep-103.1-0//ExACpLI_values.txt not found
WARNING: Failed to instantiate plugin LoFtool: ERROR: LoFtool scores file /shared/software/miniconda3-admin/envs/ensembl-vep-103.1/share/ensembl-vep-103.1-0//LoFtool_scores.txt not found
Merci par avance,
Quentin