Bonjour,
j'ai quelques problèmes avec Rstudio via ondemand. J'ai voulu utiliser la version 4.3.1 de Rstudio, et je n'arrive pas à installer de packages (j'ai testé plusieurs différents)... Je ne sais pas d'où pourrait venir le problème. J'ai tenté sur Rstudio 4.1 mais j'ai le même problème.
Merci pour votre aide,
> install.packages("scCustomize")
Installing package into ‘/shared/home/gkaraali/R/x86_64-conda-linux-gnu-library/4.3’
(as ‘lib’ is unspecified)
also installing the dependencies ‘prismatic’, ‘ggprism’, ‘janitor’, ‘paletteer’
trying URL 'https://cran.rstudio.com/src/contrib/prismatic_1.1.1.tar.gz'
Content type 'application/x-gzip' length 701517 bytes (685 KB)
==================================================
downloaded 685 KB
trying URL 'https://cran.rstudio.com/src/contrib/ggprism_1.0.4.tar.gz'
Content type 'application/x-gzip' length 2788454 bytes (2.7 MB)
==================================================
downloaded 2.7 MB
trying URL 'https://cran.rstudio.com/src/contrib/janitor_2.2.0.tar.gz'
Content type 'application/x-gzip' length 236408 bytes (230 KB)
==================================================
downloaded 230 KB
trying URL 'https://cran.rstudio.com/src/contrib/paletteer_1.6.0.tar.gz'
Content type 'application/x-gzip' length 2476216 bytes (2.4 MB)
==================================================
downloaded 2.4 MB
trying URL 'https://cran.rstudio.com/src/contrib/scCustomize_2.1.2.tar.gz'
Content type 'application/x-gzip' length 844737 bytes (824 KB)
==================================================
downloaded 824 KB
* installing *source* package ‘prismatic’ ...
** package ‘prismatic’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** byte-compile and prepare package for lazy loading
Warning in gzfile(file, mode) :
cannot open compressed file '/shared/home/gkaraali/R/x86_64-conda-linux-gnu-library/4.3/00LOCK-prismatic/00new/prismatic/R/prismatic.rdx', probable reason 'Disk quota exceeded'
Error in gzfile(file, mode) : cannot open the connection
Calls: <Anonymous> ... code2LazyLoadDB -> makeLazyLoadDB -> saveRDS -> gzfile
Execution halted
ERROR: lazy loading failed for package ‘prismatic’
* removing ‘/shared/home/gkaraali/R/x86_64-conda-linux-gnu-library/4.3/prismatic’
Warning in install.packages :
installation of package ‘prismatic’ had non-zero exit status
* installing *source* package ‘ggprism’ ...
** package ‘ggprism’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
Warning in gzfile(file, mode) :
cannot open compressed file '/shared/home/gkaraali/R/x86_64-conda-linux-gnu-library/4.3/00LOCK-ggprism/00new/ggprism/data/Rdata.rdx', probable reason 'Disk quota exceeded'
Error in gzfile(file, mode) : cannot open the connection
ERROR: lazydata failed for package ‘ggprism’
* removing ‘/shared/home/gkaraali/R/x86_64-conda-linux-gnu-library/4.3/ggprism’
Warning in install.packages :
installation of package ‘ggprism’ had non-zero exit status
* installing *source* package ‘janitor’ ...
** package ‘janitor’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
Warning in file.create(to[okay]) :
cannot create file '/shared/home/gkaraali/R/x86_64-conda-linux-gnu-library/4.3/00LOCK-janitor/00new/janitor/doc/janitor.html', reason 'Disk quota exceeded'
Warning in file.create(to[okay]) :
cannot create file '/shared/home/gkaraali/R/x86_64-conda-linux-gnu-library/4.3/00LOCK-janitor/00new/janitor/doc/tabyls.R', reason 'Disk quota exceeded'
Warning in file.create(to[okay]) :
cannot create file '/shared/home/gkaraali/R/x86_64-conda-linux-gnu-library/4.3/00LOCK-janitor/00new/janitor/doc/tabyls.Rmd', reason 'Disk quota exceeded'
Warning in file.create(to[okay]) :
cannot create file '/shared/home/gkaraali/R/x86_64-conda-linux-gnu-library/4.3/00LOCK-janitor/00new/janitor/doc/tabyls.html', reason 'Disk quota exceeded'
** byte-compile and prepare package for lazy loading
Warning in file(datafile, "wb") :
cannot open file '/shared/home/gkaraali/R/x86_64-conda-linux-gnu-library/4.3/00LOCK-janitor/00new/janitor/R/janitor.rdb': Disk quota exceeded
Error in file(datafile, "wb") : cannot open the connection
Calls: <Anonymous> -> code2LazyLoadDB -> makeLazyLoadDB -> close -> file
Execution halted
ERROR: lazy loading failed for package ‘janitor’
* removing ‘/shared/home/gkaraali/R/x86_64-conda-linux-gnu-library/4.3/janitor’
Warning in install.packages :
installation of package ‘janitor’ had non-zero exit status
ERROR: dependency ‘prismatic’ is not available for package ‘paletteer’
* removing ‘/shared/home/gkaraali/R/x86_64-conda-linux-gnu-library/4.3/paletteer’
Warning in install.packages :
installation of package ‘paletteer’ had non-zero exit status
ERROR: dependencies ‘ggprism’, ‘janitor’, ‘paletteer’ are not available for package ‘scCustomize’
* removing ‘/shared/home/gkaraali/R/x86_64-conda-linux-gnu-library/4.3/scCustomize’
Warning in install.packages :
installation of package ‘scCustomize’ had non-zero exit status
The downloaded source packages are in
‘/tmp/Rtmp8QKcnj/downloaded_packages’
Ghania